#include <string.h>
#include <iostream>
#include <TRint.h>
#include <TEnv.h>
#include "EdbLog.h"
#include "EdbRunAccess.h"
#include "EdbLinking.h"
#include "EdbScanProc.h"
#include "EdbPlateAlignment.h"
#include "EdbMosaic.h"
#include "EdbMosaicIO.h"

Include dependency graph for viewsideal.cpp:

Functions
int	main (int argc, char *argv[])

void	MosaicAlID (EdbID id, const TEnv &cenv)

void	MosaicAlSet (EdbScanSet &ss, const TEnv &cenv)

void	print_help_message ()

void	set_default (TEnv &cenv)

Function Documentation

◆ main()

int main	(	int	argc,
		char *	argv[]
	)

 {
   if (argc < 2)   { print_help_message();  return 0; }
   
   TEnv cenv("viewsidealenv");
   set_default(cenv);
   gEDBDEBUGLEVEL     = cenv.GetValue("viewsideal.EdbDebugLevel" , 1);
   const char *env    = cenv.GetValue("viewsideal.env"            , "viewsideal.rootrc");
   const char *outdir = cenv.GetValue("viewsideal.outdir"         , "..");
   
   bool      do_single   = false;
   bool      do_set      = false;
   EdbID     id;
   
   for(int i=1; i<argc; i++ ) {
     char *key  = argv[i];
     
     if(!strncmp(key,"-set=",5))
     {
       if(strlen(key)>5) if(id.Set(key+5))   do_set=true;
     }
     else if(!strncmp(key,"-id=",4))
     {
       if(strlen(key)>4) if(id.Set(key+4))   do_single=true;
     }
     else if(!strncmp(key,"-v=",3))
     {
       if(strlen(key)>3) gEDBDEBUGLEVEL = atoi(key+3);
     }
   }
   
   if(!(do_single||do_set))   { print_help_message(); return 0; }
   if(  do_single&&do_set )   { print_help_message(); return 0; }
   
   cenv.SetValue("viewsideal.env"            , env);
   cenv.ReadFile( cenv.GetValue("viewsideal.env"   , "viewsideal.rootrc") ,kEnvLocal);
   cenv.SetValue("viewsideal.outdir"         , outdir);
   
   EdbScanProc sproc;
   sproc.eProcDirClient = cenv.GetValue("viewsideal.outdir","..");
   cenv.WriteFile("viewsideal.save.rootrc");
   
   printf("\n----------------------------------------------------------------------------\n");
   printf("viewsideal  %s\n"      ,id.AsString()    );
   printf(  "----------------------------------------------------------------------------\n\n");
   printf("fedra.vsa.ImageCorrSide1: %s\n", cenv.GetValue("fedra.vsa.ImageCorrSide1","") );
   printf("fedra.vsa.ImageCorrSide2: %s\n", cenv.GetValue("fedra.vsa.ImageCorrSide2","") );
   
   if(do_single) 
   {
     MosaicAlID(id, cenv);
   }
   if(do_set) 
   {
     printf("\n----------------------------------------------------------------------------\n");
     printf("viewsideal set with id= %s\n", id.AsString() );
     printf("----------------------------------------------------------------------------\n\n");
     
     EdbScanSet *ss = sproc.ReadScanSet(id);
     if(ss)
     {
       MosaicAlSet(*ss,cenv);
     }
   }  
   cenv.WriteFile("viewsideal.save.rootrc");
   return 1;
 }

◆ MosaicAlID()

void MosaicAlID	(	EdbID	id,
		const TEnv &	cenv
	)

 {
   EdbMosaicAl mal;
   mal.ProcRun( id, cenv );
 }

◆ MosaicAlSet()

void MosaicAlSet	(	EdbScanSet &	ss,
		const TEnv &	cenv
	)

 {
   if(sc.eIDS.GetSize()<1) return;
   for(int i=0; i<sc.eIDS.GetSize(); i++) {
     EdbID *id = (EdbID *)(sc.eIDS.At(i));        if(!id)    continue;
     //EdbPlateP *plate = sc.GetPlate(id->ePlate);  if(!plate) continue;
     EdbMosaicAl mal;
     mal.ProcRun( *id, cenv );
   }
 }

◆ print_help_message()

void print_help_message ( )

 {
   cout<< "\nUsage: \n";
   cout<< "\t  viewsideal  -id=ID  [-v=DEBUG] \n";
   
   cout<< "\t\t  ID      - id of the raw.root file formed as BRICK.PLATE.MAJOR.MINOR \n";
   
   cout<< "\n If the data location directory if not explicitly defined\n";
   cout<< " the current directory will be assumed to be the brick directory \n";
   cout<< "\n If the parameters file (viewsideal.rootrc) is not presented - the default \n";
   cout<< " parameters will be used. After the execution them are saved into viewsideal.save.rootrc file\n";
   cout<<endl;
 }

◆ set_default()

void set_default ( TEnv & cenv )